Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851162.1_cds_XP_016511404.1_24148
CDS Infomation

[gene=LOC107828576] [db_xref=GeneID:107828576] [protein=IST1 homolog] [protein_id=XP_016511404.1] [location=join(20499..20590,20683..20815,21727..21830,21937..22108,22219..22359,22453..22577,22713..23421)] [gbkey=CDS]
Sequence

ATGACAGCAGCAAGTGCAGCCACCAAGCACTGCAAGAAGGCCGTGAAAATGGGTCTATCT
CTCTTCTGCAGAACATTCAATTCCTCTAAATGCAAGACAATGGCGAAGATGGCGGTGGCG
AGGATTAAATTGCTGAGGAACAAGAGGGAAGTGGTTGTACGGCAAATGAGGAGAGACATT
GCTATGCTTCTTGAGTCCCGTCAGGATGCCACTGCTCGTATTCGGGTTGAACATGTGATA
AGAGAACAAAACATATTGCAAGCAAATGAGTTTCTCGAGCTCTTCTGTGAACTTATTGTG
GCTAGACTTCCTATTATTGCAAAACAAAAGGAATGTCCAGCTGATCTGAAAGAGGGAATA
TCAAGTTTGATTTTTGCAGCCCCTCGGTGCTCAGATATTCCGGAATTGATGAGAATTAAA
GATGTTTTTGAGAAGAAATATGGTAAAGATTTTGTTTCTGCAGCCACTGATCTGCGACCC
AATGCTGGTGTAAACCGAACGCTCATTGAGAAGCTCTCTGTGAAGACTCCAAGTGGTGAA
GTTAAACTTAAAATCATGAAGGAAATAGCCAAGGAATACCAGGTCGATTGGGACACTGCA
GAATCAGAGGTGGAGCTTCTCAAGCCACCAGAAGAGCGTATAGACGGACCCGACAGCTTT
GTAAGTGCCACTAGCTTGCCCCTGAAGCCAACCCCAAAGCAACCTGCTGAGCCTAATAAC
CTTCCGAGGAATTCAAAGCAACCTGCTGAGCCTAATGACCTTCCGAGGGCTTCAGATGAT
GGAGAATCGAAAGTCACCAAATTTGACGACCCAGCATCAGCGGCTAAAGCAGCTGCTGAA
TCTGCCAAGCAAGCTATTGCGGCTGCTGAAGCAGCTGCATATTTGGCCAGTAAAGATGCA
AAAGCATCTACTGGTCGTCATCACTCTATGAATAATGCAACTGTTGACAATATTCCTTAT
GTTTCTGGTGCTCCTGTCCCCAAGTTCTCTCGAAATGATGGGGCACCAACTTCTCAGTCT
ATAGTTGATCTGTTTGATGATCATTGGAGTAAGAACATGAGGAATCCTGAAAATACTGAG
ATGAAAAGATCACAGAAGTTCTGTAGGAGACATAGCTATAATGTTCCATCCTCAAATTCC
AATGTGAAGTATGATGATGATTCAGATTGTGATGAGGAAATTGAGATGGAAGATCCGCCG
AGTGGCAATGCATATCAACACAGCCCACCTACTGATGCTAATGGTGGAAAGTTCTATAGA
AGGCACAGCTATAATGTTCCGTCCTCACATTCCGGTATCAAGTTTGATGAATCAGATGGG
GATGAAGAGATAGAAACTGAAGATGCCACAACAGGTTCCAACCGAGCCCCCAACCGGCCT
GCACCTCAAGTACCTCGGGTTCATCCCAAATTGCCTGACTACGACACACTTGCTGCTCGC
TTTGAGTCTCTCAATTCCCGGAACTTTCGGACATAG

Peptide Sequence

PEP ID

XP_016511404.1
PEP Infomation

PREDICTED: IST1 homolog [Nicotiana tabacum]
Sequence

MTAASAATKHCKKAVKMGLSLFCRTFNSSKCKTMAKMAVARIKLLRNKREVVVRQMRRDI
AMLLESRQDATARIRVEHVIREQNILQANEFLELFCELIVARLPIIAKQKECPADLKEGI
SSLIFAAPRCSDIPELMRIKDVFEKKYGKDFVSAATDLRPNAGVNRTLIEKLSVKTPSGE
VKLKIMKEIAKEYQVDWDTAESEVELLKPPEERIDGPDSFVSATSLPLKPTPKQPAEPNN
LPRNSKQPAEPNDLPRASDDGESKVTKFDDPASAAKAAAESAKQAIAAAEAAAYLASKDA
KASTGRHHSMNNATVDNIPYVSGAPVPKFSRNDGAPTSQSIVDLFDDHWSKNMRNPENTE
MKRSQKFCRRHSYNVPSSNSNVKYDDDSDCDEEIEMEDPPSGNAYQHSPPTDANGGKFYR
RHSYNVPSSHSGIKFDESDGDEEIETEDATTGSNRAPNRPAPQVPRVHPKLPDYDTLAAR
FESLNSRNFRT

Transcript Sequence

Gene sequence data has not been registered.